BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B06SP1|AL425640
(764 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1504 0.0
>3x_Contig1682
Length = 16889
Score = 1504 bits (756), Expect = 0.0
Identities = 760/764 (99%)
Strand = Plus / Plus
Query: 1 atcagcttctgtttcaccggcttctagcggagttggtgcggtttcttcaattgtctcgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11500 atcagcttctgtttcaccggcttctagcggagttggtgcggtttcttcaattgtctcgtt 11559
Query: 61 tgckgtattgtctatkatttctgttggttgctcttctgccgggacttctacaggaacttc 120
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11560 tgctgtattgtctattatttctgttggttgctcttctgccgggacttctacaggaacttc 11619
Query: 121 ttctacggatgcttcgacattgatctcttctccgacggtaggagcttcggatgctggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11620 ttctacggatgcttcgacattgatctcttctccgacggtaggagcttcggatgctggagc 11679
Query: 181 ttcttcttcttcttcttgtttcagcacttgtggctgatcagttggcggtgttgccgcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11680 ttcttcttcttcttcttgtttcagcacttgtggctgatcagttggcggtgttgccgcttc 11739
Query: 241 tggttcttcatgtgaagatagtgtctctggctcttcttctacctttttggatgcttcttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11740 tggttcttcatgtgaagatagtgtctctggctcttcttctacctttttggatgcttcttg 11799
Query: 301 tgcttcttgtggaggtgttacctctgagacagctggttctgtttcttctgggacaactga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11800 tgcttcttgtggaggtgttacctctgagacagctggttctgtttcttctgggacaactga 11859
Query: 361 ctctggttcttcttggacagctggttctgtttcttcttggacgatcagttctgtttcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11860 ctctggttcttcttggacagctggttctgtttcttcttggacgatcagttctgtttcttc 11919
Query: 421 ttgaacgaccggtgcattttcttctggagcyggttgtgtttcttctggaacaattggttc 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 11920 ttgaacgaccggtgcattttcttctggagctggttgtgtttcttctggaacaattggttc 11979
Query: 481 aactacttctacttcttttgcagtcgtttctgtcccatctggagatgtcgcctgtbctgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 11980 aactacttctacttcttttgcagtcgtttctgtcccatctggagatgtcgcctgttctgg 12039
Query: 541 ctccctctctggtgcagtttccttcaaggcatcacctgacgaaggtgcagctgctgtgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12040 ctccctctctggtgcagtttccttcaaggcatcacctgacgaaggtgcagctgctgtgaa 12099
Query: 601 cttgtaatttaagaaattggatggatctgaatccaggtagaaatctctgacacccacgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12100 cttgtaatttaagaaattggatggatctgaatccaggtagaaatctctgacacccacgat 12159
Query: 661 tcgtttttccagttcacaggccctaatccattcaggtctgacaattggtatattgttatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12160 tcgtttttccagttcacaggccctaatccattcaggtctgacaattggtatattgttatc 12219
Query: 721 tctagcatgagccaattcctcatcggaagtaacgccttcgctat 764
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12220 tctagcatgagccaattcctcatcggaagtaacgccttcgctat 12263
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7603
Number of Sequences: 1807
Number of extensions: 7603
Number of successful extensions: 332
Number of sequences better than 1.0e-20: 1
length of query: 764
length of database: 10,358,551
effective HSP length: 16
effective length of query: 748
effective length of database: 10,329,639
effective search space: 7726569972
effective search space used: 7726569972
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)